Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPS1P31327 AC011477.7-201ENST00000617163 1440 ntBASIC19.34■□□□□ 0.69
CPS1P31327 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.34■□□□□ 0.69
CPS1P31327 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 SERPINB8P1-201ENST00000401898 377 ntBASIC19.34■□□□□ 0.69
CPS1P31327 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 AC012513.2-201ENST00000441511 1137 ntBASIC19.34■□□□□ 0.69
CPS1P31327 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC19.34■□□□□ 0.69
CPS1P31327 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 AL078624.1-201ENST00000604004 547 ntBASIC19.34■□□□□ 0.69
CPS1P31327 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.34■□□□□ 0.69
CPS1P31327 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC19.34■□□□□ 0.69
CPS1P31327 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 NRADDP-202ENST00000641269 1585 ntBASIC19.34■□□□□ 0.69
CPS1P31327 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPS1P31327 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPS1P31327 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPS1P31327 TUBB4AP1-201ENST00000450755 1325 ntBASIC19.33■□□□□ 0.69
CPS1P31327 CICP24-201ENST00000605464 2705 ntBASIC19.33■□□□□ 0.69
CPS1P31327 AC024075.2-201ENST00000598112 1473 ntBASIC19.33■□□□□ 0.69
CPS1P31327 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPS1P31327 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CPS1P31327 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CPS1P31327 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC19.33■□□□□ 0.68
CPS1P31327 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC19.33■□□□□ 0.68
CPS1P31327 PMM2-216ENST00000569958 698 ntTSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC19.33■□□□□ 0.68
CPS1P31327 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC19.33■□□□□ 0.68
CPS1P31327 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC19.33■□□□□ 0.68
CPS1P31327 AC099552.4-201ENST00000624248 949 ntBASIC19.33■□□□□ 0.68
CPS1P31327 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CPS1P31327 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.33■□□□□ 0.68
CPS1P31327 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CPS1P31327 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC19.33■□□□□ 0.68
CPS1P31327 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPS1P31327 AC012617.1-204ENST00000586340 2305 ntBASIC19.33■□□□□ 0.68
CPS1P31327 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.32■□□□□ 0.68
CPS1P31327 AC124944.3-201ENST00000607976 1304 ntBASIC19.32■□□□□ 0.68
CPS1P31327 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC19.32■□□□□ 0.68
CPS1P31327 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CPS1P31327 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CPS1P31327 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 SDCBP2P1-201ENST00000416115 614 ntBASIC19.32■□□□□ 0.68
CPS1P31327 YBX1P3-201ENST00000468366 909 ntBASIC19.32■□□□□ 0.68
CPS1P31327 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC19.32■□□□□ 0.68
CPS1P31327 RN7SL134P-201ENST00000579756 303 ntBASIC19.32■□□□□ 0.68
CPS1P31327 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC19.32■□□□□ 0.68
CPS1P31327 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC19.32■□□□□ 0.68
CPS1P31327 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CPS1P31327 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CPS1P31327 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
CPS1P31327 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.32■□□□□ 0.68
CPS1P31327 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPS1P31327 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CPS1P31327 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms