Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXA6P31267 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXA6P31267 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXA6P31267 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXA6P31267 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HOXA6P31267 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HOXA6P31267 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 SDCBP2P1-201ENST00000416115 614 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 CDK4P1-201ENST00000454213 828 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC13.74□□□□□ -0.21
HOXA6P31267 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.74□□□□□ -0.21
HOXA6P31267 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC13.74□□□□□ -0.21
HOXA6P31267 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 AC005746.3-201ENST00000614751 393 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HOXA6P31267 CICP4-201ENST00000447359 2812 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXA6P31267 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXA6P31267 KRT8P25-201ENST00000473150 1456 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 AL121753.2-201ENST00000624581 1461 ntBASIC13.74□□□□□ -0.21
HOXA6P31267 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HOXA6P31267 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 U73169.1-201ENST00000395152 367 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 SNORD88B-201ENST00000408454 91 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.73□□□□□ -0.21
HOXA6P31267 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC092910.2-201ENST00000491262 348 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 MARK2P17-201ENST00000498560 841 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 RNA5SP420-201ENST00000516997 137 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.73□□□□□ -0.21
HOXA6P31267 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXA6P31267 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXA6P31267 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXA6P31267 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXA6P31267 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms