Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 PCDHB19P-202ENST00000625133 2914 ntBASIC13.15□□□□□ -0.3
BMP4P12644 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
BMP4P12644 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 LRRC59-203ENST00000576448 1531 ntBASIC13.14□□□□□ -0.31
BMP4P12644 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
BMP4P12644 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 AC119751.2-201ENST00000504529 210 ntBASIC13.14□□□□□ -0.31
BMP4P12644 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.14□□□□□ -0.31
BMP4P12644 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.14□□□□□ -0.31
BMP4P12644 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 SNX29P1-201ENST00000548357 1007 ntBASIC13.14□□□□□ -0.31
BMP4P12644 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.14□□□□□ -0.31
BMP4P12644 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 MIR4259-201ENST00000584466 101 ntBASIC13.14□□□□□ -0.31
BMP4P12644 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.14□□□□□ -0.31
BMP4P12644 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.14□□□□□ -0.31
BMP4P12644 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.14□□□□□ -0.31
BMP4P12644 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BMP4P12644 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BMP4P12644 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 AC215219.1-201ENST00000400706 1817 ntBASIC13.13□□□□□ -0.31
BMP4P12644 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.13□□□□□ -0.31
BMP4P12644 AC110048.1-201ENST00000604293 2157 ntBASIC13.13□□□□□ -0.31
BMP4P12644 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
BMP4P12644 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.13□□□□□ -0.31
BMP4P12644 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.13□□□□□ -0.31
BMP4P12644 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
BMP4P12644 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
BMP4P12644 AL035696.2-201ENST00000407941 709 ntBASIC13.13□□□□□ -0.31
BMP4P12644 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms