Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.93□□□□□ -0.18
PCNAP12004 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PCNAP12004 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.93□□□□□ -0.18
PCNAP12004 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.93□□□□□ -0.18
PCNAP12004 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.93□□□□□ -0.18
PCNAP12004 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
PCNAP12004 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.93□□□□□ -0.18
PCNAP12004 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PCNAP12004 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PCNAP12004 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PCNAP12004 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PCNAP12004 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 PCDHA5-203ENST00000614258 4248 ntBASIC13.92□□□□□ -0.18
PCNAP12004 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 AC015818.8-201ENST00000587907 1519 ntBASIC13.92□□□□□ -0.18
PCNAP12004 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 USP17L6P-201ENST00000382470 1197 ntBASIC13.92□□□□□ -0.18
PCNAP12004 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 AL354877.1-201ENST00000424412 413 ntBASIC13.92□□□□□ -0.18
PCNAP12004 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.92□□□□□ -0.18
PCNAP12004 MTX1P1-201ENST00000440904 838 ntBASIC13.92□□□□□ -0.18
PCNAP12004 AC012441.2-201ENST00000444843 739 ntBASIC13.92□□□□□ -0.18
PCNAP12004 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 BNIP3P42-201ENST00000454982 569 ntBASIC13.92□□□□□ -0.18
PCNAP12004 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.92□□□□□ -0.18
PCNAP12004 BNIP3P29-201ENST00000598302 571 ntBASIC13.92□□□□□ -0.18
PCNAP12004 AC021016.3-201ENST00000608367 477 ntBASIC13.92□□□□□ -0.18
PCNAP12004 AC011447.5-201ENST00000616168 564 ntBASIC13.92□□□□□ -0.18
PCNAP12004 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 AL162426.1-201ENST00000624141 743 ntBASIC13.92□□□□□ -0.18
PCNAP12004 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.92□□□□□ -0.18
PCNAP12004 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.92□□□□□ -0.18
PCNAP12004 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PCNAP12004 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
PCNAP12004 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.91□□□□□ -0.18
PCNAP12004 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
PCNAP12004 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PCNAP12004 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PCNAP12004 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PCNAP12004 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms