Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL512310.5-201ENST00000551999 515 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 RN7SL190P-201ENST00000582519 257 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AC006480.2-201ENST00000609770 1337 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
FREM3P0C091 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AGAP10P-201ENST00000454844 2418 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AL627231.1-201ENST00000394467 1125 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.86□□□□□ -0.35
FREM3P0C091 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.86□□□□□ -0.35
FREM3P0C091 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.86□□□□□ -0.35
FREM3P0C091 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.86□□□□□ -0.35
FREM3P0C091 CR383656.3-201ENST00000551315 183 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AL133467.4-201ENST00000602953 725 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 AC242376.2-201ENST00000619355 883 ntBASIC12.86□□□□□ -0.35
FREM3P0C091 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.86□□□□□ -0.35
FREM3P0C091 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC005014.1-201ENST00000432006 2976 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.85□□□□□ -0.35
FREM3P0C091 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.85□□□□□ -0.35
FREM3P0C091 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.85□□□□□ -0.35
FREM3P0C091 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.85□□□□□ -0.35
FREM3P0C091 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
FREM3P0C091 AC084781.1-201ENST00000613737 656 ntBASIC12.85□□□□□ -0.35
FREM3P0C091 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.85□□□□□ -0.35
FREM3P0C091 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.85□□□□□ -0.35
FREM3P0C091 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
FREM3P0C091 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms