Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AL691403.2-201ENST00000618460 490 ntBASIC12.98□□□□□ -0.33
HTR1AP08908 CR392039.2-201ENST00000623182 509 ntBASIC12.98□□□□□ -0.33
HTR1AP08908 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.98□□□□□ -0.33
HTR1AP08908 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HTR1AP08908 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HTR1AP08908 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
HTR1AP08908 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HTR1AP08908 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
HTR1AP08908 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HTR1AP08908 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HTR1AP08908 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
HTR1AP08908 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.98□□□□□ -0.33
HTR1AP08908 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HTR1AP08908 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HTR1AP08908 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 AC025183.3-201ENST00000623526 1482 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
HTR1AP08908 ACTBP8-201ENST00000403258 1108 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC055876.3-201ENST00000431496 288 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC055876.2-201ENST00000531834 546 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC124283.3-201ENST00000570869 594 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC138649.4-201ENST00000612222 287 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 AP005019.2-201ENST00000615104 511 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.97□□□□□ -0.33
HTR1AP08908 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 AC008761.3-201ENST00000624803 892 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 TNRC18P1-201ENST00000502875 3650 ntBASIC12.97□□□□□ -0.33
HTR1AP08908 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
HTR1AP08908 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HTR1AP08908 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HTR1AP08908 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HTR1AP08908 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 AC022400.8-201ENST00000623453 3599 ntBASIC12.96□□□□□ -0.33
HTR1AP08908 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
HTR1AP08908 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR1AP08908 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
HTR1AP08908 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HTR1AP08908 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.96□□□□□ -0.33
HTR1AP08908 AC124319.4-201ENST00000622931 2161 ntBASIC12.96□□□□□ -0.33
HTR1AP08908 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms