Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TPM2P07951 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM2P07951 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 AL162726.2-201ENST00000438986 1017 ntBASIC16.26■□□□□ 0.19
TPM2P07951 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM2P07951 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM2P07951 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.26■□□□□ 0.19
TPM2P07951 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TPM2P07951 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.26■□□□□ 0.19
TPM2P07951 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 AC005498.2-205ENST00000593218 784 ntBASIC16.26■□□□□ 0.19
TPM2P07951 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.26■□□□□ 0.19
TPM2P07951 AC004233.3-201ENST00000607794 1269 ntBASIC16.26■□□□□ 0.19
TPM2P07951 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 AL355102.3-201ENST00000554299 1678 ntBASIC16.26■□□□□ 0.19
TPM2P07951 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TPM2P07951 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM2P07951 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM2P07951 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM2P07951 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
TPM2P07951 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 AL138725.1-201ENST00000407347 1314 ntBASIC16.25■□□□□ 0.19
TPM2P07951 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 AC073957.3-201ENST00000609998 6758 ntBASIC16.25■□□□□ 0.19
TPM2P07951 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TPM2P07951 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 MYCLP2-201ENST00000449268 967 ntBASIC16.25■□□□□ 0.19
TPM2P07951 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM2P07951 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 AC005252.2-201ENST00000624630 1141 ntBASIC16.25■□□□□ 0.19
TPM2P07951 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 OR2I1P-208ENST00000641137 4948 ntBASIC16.25■□□□□ 0.19
TPM2P07951 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 AL021155.1-201ENST00000438808 2637 ntBASIC16.25■□□□□ 0.19
TPM2P07951 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM2P07951 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM2P07951 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM2P07951 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
TPM2P07951 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM2P07951 AC007541.1-201ENST00000570282 1469 ntBASIC16.24■□□□□ 0.19
TPM2P07951 UBTFL8-201ENST00000426903 2112 ntBASIC16.24■□□□□ 0.19
TPM2P07951 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms