Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
RETP07949 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RETP07949 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 AC010327.5-201ENST00000586923 3061 ntBASIC14.3□□□□□ -0.12
RETP07949 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RETP07949 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.3□□□□□ -0.12
RETP07949 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.3□□□□□ -0.12
RETP07949 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RETP07949 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RETP07949 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RETP07949 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RETP07949 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RETP07949 NHP2P1-201ENST00000335274 462 ntBASIC14.3□□□□□ -0.12
RETP07949 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RETP07949 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.3□□□□□ -0.12
RETP07949 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.3□□□□□ -0.12
RETP07949 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.3□□□□□ -0.12
RETP07949 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.3□□□□□ -0.12
RETP07949 BRI3P1-201ENST00000440440 378 ntBASIC14.3□□□□□ -0.12
RETP07949 AC098934.1-203ENST00000442868 1262 ntBASIC14.3□□□□□ -0.12
RETP07949 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.3□□□□□ -0.12
RETP07949 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.3□□□□□ -0.12
RETP07949 RN7SL582P-201ENST00000491078 279 ntBASIC14.3□□□□□ -0.12
RETP07949 RNA5SP406-201ENST00000516106 112 ntBASIC14.3□□□□□ -0.12
RETP07949 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.3□□□□□ -0.12
RETP07949 RN7SL665P-201ENST00000578793 300 ntBASIC14.3□□□□□ -0.12
RETP07949 MIR5001-201ENST00000580185 100 ntBASIC14.3□□□□□ -0.12
RETP07949 CYP4F36P-201ENST00000589193 186 ntBASIC14.3□□□□□ -0.12
RETP07949 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
RETP07949 AC010976.2-201ENST00000609697 852 ntBASIC14.3□□□□□ -0.12
RETP07949 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.3□□□□□ -0.12
RETP07949 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RETP07949 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.3□□□□□ -0.12
RETP07949 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 ENPP7P8-202ENST00000527856 1345 ntBASIC14.3□□□□□ -0.12
RETP07949 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 AC025183.3-201ENST00000623526 1482 ntBASIC14.3□□□□□ -0.12
RETP07949 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RETP07949 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
RETP07949 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RETP07949 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RETP07949 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RETP07949 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.29□□□□□ -0.12
RETP07949 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RETP07949 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RETP07949 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.29□□□□□ -0.12
RETP07949 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RETP07949 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 AC011474.4-201ENST00000623523 2076 ntBASIC14.29□□□□□ -0.12
RETP07949 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.29□□□□□ -0.12
RETP07949 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 MIR645-201ENST00000385283 94 ntBASIC14.29□□□□□ -0.12
RETP07949 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.29□□□□□ -0.12
RETP07949 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RETP07949 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.29□□□□□ -0.12
RETP07949 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.29□□□□□ -0.12
RETP07949 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RETP07949 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.29□□□□□ -0.12
RETP07949 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms