Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CTSBP07858 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.35□□□□□ -0.27
CTSBP07858 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 STK24P1-201ENST00000455035 1291 ntBASIC13.35□□□□□ -0.27
CTSBP07858 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 AC007250.1-201ENST00000608934 338 ntBASIC13.35□□□□□ -0.27
CTSBP07858 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.35□□□□□ -0.27
CTSBP07858 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.35□□□□□ -0.27
CTSBP07858 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.34□□□□□ -0.27
CTSBP07858 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 AC008620.2-201ENST00000510294 1569 ntBASIC13.34□□□□□ -0.27
CTSBP07858 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 SSR1P1-201ENST00000407630 814 ntBASIC13.34□□□□□ -0.27
CTSBP07858 RPL17P11-201ENST00000417593 544 ntBASIC13.34□□□□□ -0.27
CTSBP07858 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.34□□□□□ -0.27
CTSBP07858 AL354861.1-201ENST00000445213 355 ntBASIC13.34□□□□□ -0.27
CTSBP07858 RPL7P35-201ENST00000446943 740 ntBASIC13.34□□□□□ -0.27
CTSBP07858 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 AC090142.2-201ENST00000483263 416 ntBASIC13.34□□□□□ -0.27
CTSBP07858 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.34□□□□□ -0.27
CTSBP07858 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CTSBP07858 DNM1P30-201ENST00000563586 452 ntBASIC13.34□□□□□ -0.27
CTSBP07858 MIR4649-201ENST00000582839 64 ntBASIC13.34□□□□□ -0.27
CTSBP07858 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.34□□□□□ -0.27
CTSBP07858 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.34□□□□□ -0.27
CTSBP07858 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 ODCP-201ENST00000459650 1639 ntBASIC13.34□□□□□ -0.27
CTSBP07858 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CTSBP07858 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CTSBP07858 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms