Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 OR2W2P-201ENST00000406313 909 ntBASIC16.61■□□□□ 0.25
HLA-DOAP06340 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AL157792.1-201ENST00000488281 530 ntBASIC16.61■□□□□ 0.25
HLA-DOAP06340 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AL009176.1-201ENST00000607876 650 ntBASIC16.61■□□□□ 0.25
HLA-DOAP06340 AL031673.1-201ENST00000611460 466 ntBASIC16.61■□□□□ 0.25
HLA-DOAP06340 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 LINC00431-202ENST00000636375 159 ntBASIC16.61■□□□□ 0.25
HLA-DOAP06340 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DOAP06340 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DOAP06340 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 BX640514.1-201ENST00000583223 1918 ntBASIC16.6■□□□□ 0.25
HLA-DOAP06340 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DOAP06340 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DOAP06340 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DOAP06340 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DOAP06340 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DOAP06340 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DOAP06340 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DOAP06340 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms