Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COL5A2P05997 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COL5A2P05997 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 SAA2-206ENST00000530400 323 ntTSL 3 BASIC18.03■□□□□ 0.48
COL5A2P05997 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC18.03■□□□□ 0.48
COL5A2P05997 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC18.03■□□□□ 0.48
COL5A2P05997 ABCD1P3-201ENST00000562927 605 ntBASIC18.03■□□□□ 0.48
COL5A2P05997 NAA38-204ENST00000575208 529 ntTSL 3 BASIC18.03■□□□□ 0.48
COL5A2P05997 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COL5A2P05997 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC18.03■□□□□ 0.48
COL5A2P05997 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
COL5A2P05997 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
COL5A2P05997 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
COL5A2P05997 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
COL5A2P05997 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 AL591499.1-201ENST00000307155 1153 ntBASIC18.02■□□□□ 0.48
COL5A2P05997 SNORA50D-201ENST00000408059 134 ntBASIC18.02■□□□□ 0.48
COL5A2P05997 RBMX2P5-201ENST00000424312 969 ntBASIC18.02■□□□□ 0.48
COL5A2P05997 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.02■□□□□ 0.48
COL5A2P05997 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC18.02■□□□□ 0.48
COL5A2P05997 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC18.02■□□□□ 0.48
COL5A2P05997 AP001102.1-201ENST00000528959 409 ntBASIC18.02■□□□□ 0.48
COL5A2P05997 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
COL5A2P05997 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC18.02■□□□□ 0.48
COL5A2P05997 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC18.02■□□□□ 0.48
COL5A2P05997 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC18.02■□□□□ 0.48
COL5A2P05997 MDC1-209ENST00000613547 830 ntTSL 5 BASIC18.02■□□□□ 0.48
COL5A2P05997 COG6-212ENST00000630730 186 ntTSL 5 BASIC18.02■□□□□ 0.48
COL5A2P05997 AP000437.1-201ENST00000624057 2085 ntBASIC18.02■□□□□ 0.48
COL5A2P05997 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COL5A2P05997 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL5A2P05997 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
COL5A2P05997 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
COL5A2P05997 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 AL031590.1-202ENST00000641466 1737 ntBASIC18.02■□□□□ 0.47
COL5A2P05997 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 AC015813.5-201ENST00000624641 1514 ntBASIC18.02■□□□□ 0.47
COL5A2P05997 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 RPL4P6-201ENST00000438116 1304 ntBASIC18.02■□□□□ 0.47
COL5A2P05997 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.02■□□□□ 0.47
COL5A2P05997 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL5A2P05997 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COL5A2P05997 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COL5A2P05997 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 AP001331.1-201ENST00000413008 1015 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC18.01■□□□□ 0.47
COL5A2P05997 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL5A2P05997 SRP9P1-201ENST00000445874 261 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 RN7SL794P-201ENST00000469816 280 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 KRT18P42-201ENST00000505048 1255 ntBASIC18.01■□□□□ 0.47
COL5A2P05997 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.01■□□□□ 0.47
COL5A2P05997 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC18.01■□□□□ 0.47
COL5A2P05997 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.01■□□□□ 0.47
COL5A2P05997 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.01■□□□□ 0.47
COL5A2P05997 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms