Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AC027601.5-201ENST00000624065 2482 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 SNX18-202ENST00000343017 3140 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AL512430.1-201ENST00000392575 860 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 RPS9P1-201ENST00000419943 583 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AL161932.2-201ENST00000435436 679 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AC078991.1-201ENST00000437297 610 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LDHBP1-201ENST00000455730 1119 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 RN7SL277P-201ENST00000481521 288 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 SIGLEC18P-201ENST00000602271 909 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AC092171.5-201ENST00000608012 942 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AC021016.3-201ENST00000608367 477 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 AP002353.1-201ENST00000528257 1599 ntBASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA3F8WFD2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 KRT17P5-201ENST00000332088 839 ntBASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms