Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EMC3Q9P0I2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EMC3Q9P0I2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
EMC3Q9P0I2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
EMC3Q9P0I2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC006033.1-201ENST00000440505 426 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC005740.2-201ENST00000511085 419 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AP001258.2-201ENST00000529891 490 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC008805.1-201ENST00000590892 364 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AL118558.3-201ENST00000607414 1079 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AP000346.4-201ENST00000614827 381 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 MIR6869-201ENST00000619434 62 ntBASIC13.02□□□□□ -0.33
EMC3Q9P0I2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.02□□□□□ -0.33
EMC3Q9P0I2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.01□□□□□ -0.33
EMC3Q9P0I2 AL645933.1-201ENST00000440087 609 ntBASIC13.01□□□□□ -0.33
EMC3Q9P0I2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 SERPINA13P-202ENST00000478994 924 ntBASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 BNIP3P13-201ENST00000599968 566 ntBASIC13.01□□□□□ -0.33
EMC3Q9P0I2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EMC3Q9P0I2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms