Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UPF2Q9HAU5 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 KRT18P28-201ENST00000453838 1332 ntBASIC17.51■□□□□ 0.39
UPF2Q9HAU5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 RHPN1-AS1-201ENST00000518049 1918 ntBASIC17.51■□□□□ 0.39
UPF2Q9HAU5 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AC093512.1-201ENST00000617969 520 ntBASIC17.51■□□□□ 0.39
UPF2Q9HAU5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AC027601.3-201ENST00000622907 509 ntBASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF2Q9HAU5 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AL122018.1-201ENST00000446607 2310 ntBASIC17.5■□□□□ 0.39
UPF2Q9HAU5 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AC106820.3-201ENST00000561653 397 ntBASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AC004623.1-201ENST00000624592 2127 ntBASIC17.5■□□□□ 0.39
UPF2Q9HAU5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 AC061965.1-201ENST00000560524 1465 ntBASIC17.5■□□□□ 0.39
UPF2Q9HAU5 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF2Q9HAU5 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms