Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 HSPA7-201ENST00000445535 1927 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AC073869.2-201ENST00000417338 1026 ntBASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 RN7SL357P-201ENST00000581065 298 ntBASIC16.61■□□□□ 0.25
TRIM47Q96LD4 MIR2392-201ENST00000584881 84 ntBASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AC002044.2-201ENST00000624910 970 ntBASIC16.61■□□□□ 0.25
TRIM47Q96LD4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM47Q96LD4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ACTBP7-201ENST00000418351 1124 ntBASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 RPL18AP8-201ENST00000486071 528 ntBASIC16.6■□□□□ 0.25
TRIM47Q96LD4 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 KRT8P1-201ENST00000557533 1207 ntBASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC007250.1-201ENST00000608934 338 ntBASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms