Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RN7SL524P-201ENST00000581152 300 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNED1Q8TER0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SNED1Q8TER0 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC16.83■□□□□ 0.29
SNED1Q8TER0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SNED1Q8TER0 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.83■□□□□ 0.29
SNED1Q8TER0 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNED1Q8TER0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNED1Q8TER0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNED1Q8TER0 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 MIR611-201ENST00000384869 67 ntBASIC16.83■□□□□ 0.28
SNED1Q8TER0 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 MEP1AP1-201ENST00000636082 1097 ntBASIC16.83■□□□□ 0.28
SNED1Q8TER0 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 KRT8P38-201ENST00000441370 1430 ntBASIC16.83■□□□□ 0.28
SNED1Q8TER0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 NRADDP-202ENST00000641269 1585 ntBASIC16.83■□□□□ 0.28
SNED1Q8TER0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.83■□□□□ 0.28
SNED1Q8TER0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNED1Q8TER0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 HSPA8P5-201ENST00000456928 2069 ntBASIC16.82■□□□□ 0.28
SNED1Q8TER0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.82■□□□□ 0.28
SNED1Q8TER0 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 AC099328.1-201ENST00000498809 1030 ntBASIC16.82■□□□□ 0.28
SNED1Q8TER0 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 PRR20FP-201ENST00000603320 180 ntBASIC16.82■□□□□ 0.28
SNED1Q8TER0 AC233280.19-201ENST00000633223 136 ntBASIC16.82■□□□□ 0.28
SNED1Q8TER0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNED1Q8TER0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SNED1Q8TER0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNED1Q8TER0 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNED1Q8TER0 AL359092.2-201ENST00000423330 585 ntBASIC16.81■□□□□ 0.28
SNED1Q8TER0 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms