Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AL662907.2-201ENST00000624339 3448 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CTCFL-201ENST00000243914 3567 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 HLA-V-203ENST00000457107 4814 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 CAMK2G-206ENST00000394762 3767 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 TRPV3-211ENST00000616411 5742 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SRRM2-AS1-205ENST00000577055 1778 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC010595.1-201ENST00000507387 1453 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 KRT8P22-201ENST00000562317 1415 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC092447.8-201ENST00000566570 4162 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 PPFIA2-211ENST00000548586 4033 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AL139400.1-201ENST00000366220 510 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SHC3-201ENST00000375831 569 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SNORA81-201ENST00000408493 178 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC244033.1-201ENST00000426826 870 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 CTBP2P5-201ENST00000454986 1264 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 RPL5P16-201ENST00000471467 790 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 LDHAP1-201ENST00000509421 992 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 RN7SL275P-201ENST00000582762 335 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 RN7SL847P-201ENST00000582819 270 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AL691432.1-202ENST00000597891 502 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AP003072.3-201ENST00000623456 594 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC138627.1-204ENST00000641894 765 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 AC135048.4-201ENST00000624286 3641 ntBASIC8.41□□□□□ -1.06
SVIPQ8NHG7 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 PDE11A-201ENST00000286063 9275 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 RNLS-202ENST00000371947 3385 ntTSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ZDHHC15-203ENST00000541184 6012 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SVIPQ8NHG7 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 AC097382.2-201ENST00000500031 4300 ntTSL 2 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 LINC02099-201ENST00000517491 2791 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 AL354892.3-201ENST00000586101 1630 ntBASIC8.4□□□□□ -1.06
SVIPQ8NHG7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 LINC01654-201ENST00000569711 2471 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SVIPQ8NHG7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms