RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
LINC01654-201ENST00000569711 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
LINC01654-201ENST00000569711 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
LINC01654-201ENST00000569711 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
LINC01654-201ENST00000569711 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
LINC01654-201ENST00000569711 SUPT5HO00267 1087 aaKnown RBP18.29■□□□□ 0.52
LINC01654-201ENST00000569711 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LINC01654-201ENST00000569711 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
LINC01654-201ENST00000569711 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.45
LINC01654-201ENST00000569711 ABCC9O60706 1549 aa17.74■□□□□ 0.43
LINC01654-201ENST00000569711 HRCP23327 699 aa17.53■□□□□ 0.4
LINC01654-201ENST00000569711 SCRIBQ14160 1630 aa17.52■□□□□ 0.39
LINC01654-201ENST00000569711 NACADO15069 1562 aa17.51■□□□□ 0.39
LINC01654-201ENST00000569711 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
LINC01654-201ENST00000569711 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
LINC01654-201ENST00000569711 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
LINC01654-201ENST00000569711 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
LINC01654-201ENST00000569711 TRIM26Q12899 539 aaPredicted RBP17.2■□□□□ 0.34
LINC01654-201ENST00000569711 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
LINC01654-201ENST00000569711 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
LINC01654-201ENST00000569711 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
LINC01654-201ENST00000569711 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.33
LINC01654-201ENST00000569711 WIZO95785 1651 aa17.03■□□□□ 0.32
LINC01654-201ENST00000569711 ZEB1P37275 1124 aaPredicted RBP17■□□□□ 0.31
LINC01654-201ENST00000569711 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
LINC01654-201ENST00000569711 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
LINC01654-201ENST00000569711 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
LINC01654-201ENST00000569711 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
LINC01654-201ENST00000569711 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
LINC01654-201ENST00000569711 UNC13AQ9UPW8 1703 aa16.78■□□□□ 0.28
LINC01654-201ENST00000569711 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
LINC01654-201ENST00000569711 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
LINC01654-201ENST00000569711 EEA1Q15075 1411 aa16.71■□□□□ 0.27
LINC01654-201ENST00000569711 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
LINC01654-201ENST00000569711 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
LINC01654-201ENST00000569711 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
LINC01654-201ENST00000569711 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
LINC01654-201ENST00000569711 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
LINC01654-201ENST00000569711 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.23
LINC01654-201ENST00000569711 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
LINC01654-201ENST00000569711 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
LINC01654-201ENST00000569711 SOGA1O94964 1423 aa16.47■□□□□ 0.23
LINC01654-201ENST00000569711 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
LINC01654-201ENST00000569711 KIF21BO75037 1637 aa16.4■□□□□ 0.22
LINC01654-201ENST00000569711 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
LINC01654-201ENST00000569711 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
LINC01654-201ENST00000569711 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
LINC01654-201ENST00000569711 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
LINC01654-201ENST00000569711 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01654-201ENST00000569711 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.21
LINC01654-201ENST00000569711 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
LINC01654-201ENST00000569711 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
LINC01654-201ENST00000569711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
LINC01654-201ENST00000569711 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
LINC01654-201ENST00000569711 CLIP1P30622 1438 aa16.22■□□□□ 0.19
LINC01654-201ENST00000569711 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
LINC01654-201ENST00000569711 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
LINC01654-201ENST00000569711 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
LINC01654-201ENST00000569711 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
LINC01654-201ENST00000569711 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
LINC01654-201ENST00000569711 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.18
LINC01654-201ENST00000569711 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
LINC01654-201ENST00000569711 APLP2Q06481 763 aa16.09■□□□□ 0.17
LINC01654-201ENST00000569711 DIEXFQ68CQ4 756 aaKnown RBP16.09■□□□□ 0.17
LINC01654-201ENST00000569711 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
LINC01654-201ENST00000569711 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
LINC01654-201ENST00000569711 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
LINC01654-201ENST00000569711 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
LINC01654-201ENST00000569711 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.15
LINC01654-201ENST00000569711 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
LINC01654-201ENST00000569711 CFTRP13569 1480 aa16■□□□□ 0.15
LINC01654-201ENST00000569711 KIF27Q86VH2 1401 aa16■□□□□ 0.15
LINC01654-201ENST00000569711 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
LINC01654-201ENST00000569711 CUX1P39880 1505 aa15.97■□□□□ 0.15
LINC01654-201ENST00000569711 PRDM2Q13029 1718 aa15.96■□□□□ 0.15
LINC01654-201ENST00000569711 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
LINC01654-201ENST00000569711 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
LINC01654-201ENST00000569711 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
LINC01654-201ENST00000569711 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
LINC01654-201ENST00000569711 MAP3K1Q13233 1512 aa15.83■□□□□ 0.12
LINC01654-201ENST00000569711 CUX2O14529 1486 aa15.83■□□□□ 0.12
LINC01654-201ENST00000569711 ARHGAP35Q9NRY4 1499 aa15.79■□□□□ 0.12
LINC01654-201ENST00000569711 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
LINC01654-201ENST00000569711 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.11
LINC01654-201ENST00000569711 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
LINC01654-201ENST00000569711 IGF1RP08069 1367 aa15.74■□□□□ 0.11
LINC01654-201ENST00000569711 GTF3C3Q9Y5Q9 886 aa15.74■□□□□ 0.11
LINC01654-201ENST00000569711 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
LINC01654-201ENST00000569711 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
LINC01654-201ENST00000569711 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
LINC01654-201ENST00000569711 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
LINC01654-201ENST00000569711 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
LINC01654-201ENST00000569711 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
LINC01654-201ENST00000569711 MIER1Q8N108 512 aa15.66■□□□□ 0.1
LINC01654-201ENST00000569711 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
LINC01654-201ENST00000569711 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
LINC01654-201ENST00000569711 CFAP43Q8NDM7 1665 aa15.61■□□□□ 0.09
LINC01654-201ENST00000569711 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
LINC01654-201ENST00000569711 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
LINC01654-201ENST00000569711 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms