RNA–Protein interactions for RNA: ENST00000616411.4

TRPV3-211, Transcript of transient receptor potential cation channel subfamily V member 3, humanhuman

TSL 5 BASIC

Gene TRPV3, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV3-211ENST00000616411 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
TRPV3-211ENST00000616411 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
TRPV3-211ENST00000616411 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
TRPV3-211ENST00000616411 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
TRPV3-211ENST00000616411 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
TRPV3-211ENST00000616411 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
TRPV3-211ENST00000616411 HRCP23327 699 aa17.19■□□□□ 0.34
TRPV3-211ENST00000616411 MYT1Q01538 1121 aa17.13■□□□□ 0.33
TRPV3-211ENST00000616411 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
TRPV3-211ENST00000616411 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
TRPV3-211ENST00000616411 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
TRPV3-211ENST00000616411 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
TRPV3-211ENST00000616411 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
TRPV3-211ENST00000616411 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.25
TRPV3-211ENST00000616411 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
TRPV3-211ENST00000616411 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
TRPV3-211ENST00000616411 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
TRPV3-211ENST00000616411 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
TRPV3-211ENST00000616411 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
TRPV3-211ENST00000616411 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
TRPV3-211ENST00000616411 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.19
TRPV3-211ENST00000616411 APLP2Q06481 763 aa16.25■□□□□ 0.19
TRPV3-211ENST00000616411 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
TRPV3-211ENST00000616411 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
TRPV3-211ENST00000616411 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
TRPV3-211ENST00000616411 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
TRPV3-211ENST00000616411 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
TRPV3-211ENST00000616411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
TRPV3-211ENST00000616411 NEFLP07196 543 aa16.03■□□□□ 0.16
TRPV3-211ENST00000616411 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
TRPV3-211ENST00000616411 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
TRPV3-211ENST00000616411 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
TRPV3-211ENST00000616411 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
TRPV3-211ENST00000616411 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
TRPV3-211ENST00000616411 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
TRPV3-211ENST00000616411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
TRPV3-211ENST00000616411 BCANQ96GW7 911 aa15.59■□□□□ 0.09
TRPV3-211ENST00000616411 CLSPNQ9HAW4 1339 aa15.55■□□□□ 0.08
TRPV3-211ENST00000616411 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
TRPV3-211ENST00000616411 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
TRPV3-211ENST00000616411 ITGAEP38570 1179 aa15.43■□□□□ 0.06
TRPV3-211ENST00000616411 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
TRPV3-211ENST00000616411 CDK11AQ9UQ88 783 aaPredicted RBP15.37■□□□□ 0.05
TRPV3-211ENST00000616411 MIER1Q8N108 512 aa15.35■□□□□ 0.05
TRPV3-211ENST00000616411 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
TRPV3-211ENST00000616411 FKBP8Q14318 412 aa15.29■□□□□ 0.04
TRPV3-211ENST00000616411 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
TRPV3-211ENST00000616411 ANP32CO43423 234 aa15.25■□□□□ 0.03
TRPV3-211ENST00000616411 ABCC9O60706 1549 aa15.21■□□□□ 0.02
TRPV3-211ENST00000616411 BCL11AQ9H165 835 aa15.2■□□□□ 0.02
TRPV3-211ENST00000616411 MYT1LQ9UL68 1186 aa15.18■□□□□ 0.02
TRPV3-211ENST00000616411 SUPT16HQ9Y5B9 1047 aaKnown RBP15.11■□□□□ 0.01
TRPV3-211ENST00000616411 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
TRPV3-211ENST00000616411 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
TRPV3-211ENST00000616411 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
TRPV3-211ENST00000616411 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
TRPV3-211ENST00000616411 CNGB1Q14028 1251 aaPredicted RBP15.06■□□□□ 0
TRPV3-211ENST00000616411 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRPV3-211ENST00000616411 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
TRPV3-211ENST00000616411 NBR1Q14596 966 aa14.98□□□□□ -0.01
TRPV3-211ENST00000616411 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
TRPV3-211ENST00000616411 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
TRPV3-211ENST00000616411 TRIM52Q96A61 297 aa14.96□□□□□ -0.02
TRPV3-211ENST00000616411 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRPV3-211ENST00000616411 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
TRPV3-211ENST00000616411 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
TRPV3-211ENST00000616411 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
TRPV3-211ENST00000616411 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
TRPV3-211ENST00000616411 IRX6P78412 446 aaPredicted RBP14.85□□□□□ -0.03
TRPV3-211ENST00000616411 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
TRPV3-211ENST00000616411 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
TRPV3-211ENST00000616411 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
TRPV3-211ENST00000616411 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
TRPV3-211ENST00000616411 TNIKQ9UKE5 1360 aa14.79□□□□□ -0.04
TRPV3-211ENST00000616411 CLIP1P30622 1438 aa14.79□□□□□ -0.04
TRPV3-211ENST00000616411 TONSLQ96HA7 1378 aa14.78□□□□□ -0.04
TRPV3-211ENST00000616411 EEA1Q15075 1411 aa14.75□□□□□ -0.05
TRPV3-211ENST00000616411 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
TRPV3-211ENST00000616411 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
TRPV3-211ENST00000616411 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
TRPV3-211ENST00000616411 GLIPR1L2Q4G1C9 344 aa14.71□□□□□ -0.05
TRPV3-211ENST00000616411 HIRIP3Q9BW71 556 aaPredicted RBP14.7□□□□□ -0.06
TRPV3-211ENST00000616411 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
TRPV3-211ENST00000616411 ZNF326Q5BKZ1 582 aaKnown RBP14.64□□□□□ -0.07
TRPV3-211ENST00000616411 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
TRPV3-211ENST00000616411 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
TRPV3-211ENST00000616411 MRS2Q9HD23 443 aa14.62□□□□□ -0.07
TRPV3-211ENST00000616411 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
TRPV3-211ENST00000616411 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
TRPV3-211ENST00000616411 CCER2I3L3R5 266 aa14.56□□□□□ -0.08
TRPV3-211ENST00000616411 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
TRPV3-211ENST00000616411 DDRGK1Q96HY6 314 aa14.54□□□□□ -0.08
TRPV3-211ENST00000616411 SOGA1O94964 1423 aa14.52□□□□□ -0.09
TRPV3-211ENST00000616411 NEFMP07197 916 aa14.51□□□□□ -0.09
TRPV3-211ENST00000616411 B4GALNT3Q6L9W6 998 aa14.51□□□□□ -0.09
TRPV3-211ENST00000616411 PPM1GO15355 546 aaPredicted RBP14.51□□□□□ -0.09
TRPV3-211ENST00000616411 LAS1LQ9Y4W2 734 aaKnown RBP14.5□□□□□ -0.09
TRPV3-211ENST00000616411 CANXP27824 592 aaKnown RBP14.49□□□□□ -0.09
TRPV3-211ENST00000616411 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
TRPV3-211ENST00000616411 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms