Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL009176.1-201ENST00000607876 650 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AC007191.1-201ENST00000623179 2995 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 KRT8P18-201ENST00000413425 1445 ntBASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 AL512599.1-201ENST00000430724 685 ntBASIC15.3■□□□□ 0.04
HERC6Q8IVU3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 CICP4-201ENST00000447359 2812 ntBASIC15.3■□□□□ 0.04
HERC6Q8IVU3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PRSS3P1-201ENST00000503996 742 ntBASIC15.3■□□□□ 0.04
HERC6Q8IVU3 EEF1GP8-201ENST00000506566 1154 ntBASIC15.3■□□□□ 0.04
HERC6Q8IVU3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HERC6Q8IVU3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 CCT8L1P-201ENST00000465400 1674 ntBASIC15.29■□□□□ 0.04
HERC6Q8IVU3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 LINC00552-201ENST00000625151 2579 ntBASIC15.29■□□□□ 0.04
HERC6Q8IVU3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms