Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AF274858.1-201ENST00000406288 372 ntBASIC15.02■□□□□ -0
NPAS4Q8IUM7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 GULOP-201ENST00000454030 748 ntBASIC15.02■□□□□ -0
NPAS4Q8IUM7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.02■□□□□ -0
NPAS4Q8IUM7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 CICP24-201ENST00000605464 2705 ntBASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPAS4Q8IUM7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AC005722.1-201ENST00000431878 964 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 NRADDP-201ENST00000437305 691 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 NAV1-210ENST00000593583 726 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 MIR8071-1-201ENST00000616769 65 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 MIR8071-2-201ENST00000616772 65 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AC126755.5-201ENST00000622756 267 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AC012617.1-204ENST00000586340 2305 ntBASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPAS4Q8IUM7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPAS4Q8IUM7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NPAS4Q8IUM7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPAS4Q8IUM7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms