Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 AC097359.2-201ENST00000604992 2389 ntBASIC15.12■□□□□ 0.01
RNF135Q8IUD6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 ALG3P1-201ENST00000508806 1114 ntBASIC15.12■□□□□ 0.01
RNF135Q8IUD6 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 FTLP5-201ENST00000586853 534 ntBASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 AL627230.2-201ENST00000613254 655 ntBASIC15.12■□□□□ 0.01
RNF135Q8IUD6 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF135Q8IUD6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 RN7SKP109-201ENST00000410592 316 ntBASIC15.11■□□□□ 0.01
RNF135Q8IUD6 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 RN7SL494P-201ENST00000461517 304 ntBASIC15.11■□□□□ 0.01
RNF135Q8IUD6 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 MIR6816-201ENST00000620368 66 ntBASIC15.11■□□□□ 0.01
RNF135Q8IUD6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.11■□□□□ 0.01
RNF135Q8IUD6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RNF135Q8IUD6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF135Q8IUD6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms