Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 MIR611-201ENST00000384869 67 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AC000077.1-201ENST00000420012 953 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 FDPSP7-201ENST00000429043 1054 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 HLA-W-207ENST00000439514 771 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AC092910.2-201ENST00000491262 348 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 MIR5091-201ENST00000578707 93 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 PRR20FP-201ENST00000603320 180 ntBASIC17.44■□□□□ 0.38
RC3H1Q5TC82 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RC3H1Q5TC82 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 RN7SKP212-201ENST00000410851 328 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 FAM197Y6-201ENST00000420524 766 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CCND3P2-201ENST00000579393 537 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 BAP1-211ENST00000615113 489 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AF013593.1-201ENST00000458074 1487 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 AL121753.2-201ENST00000624581 1461 ntBASIC17.43■□□□□ 0.38
RC3H1Q5TC82 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RC3H1Q5TC82 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms