Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.92□□□□□ -0.02
IRX4P78413 AL355334.1-201ENST00000417713 215 ntBASIC14.92□□□□□ -0.02
IRX4P78413 AC006335.1-201ENST00000445200 547 ntBASIC14.92□□□□□ -0.02
IRX4P78413 TUBB8P8-201ENST00000458717 1058 ntBASIC14.92□□□□□ -0.02
IRX4P78413 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 MARK2P5-201ENST00000507649 634 ntBASIC14.92□□□□□ -0.02
IRX4P78413 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.92□□□□□ -0.02
IRX4P78413 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 AC020922.3-201ENST00000595064 547 ntBASIC14.92□□□□□ -0.02
IRX4P78413 AC073352.2-201ENST00000609385 439 ntBASIC14.92□□□□□ -0.02
IRX4P78413 AL353770.1-201ENST00000614915 403 ntBASIC14.92□□□□□ -0.02
IRX4P78413 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
IRX4P78413 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.92□□□□□ -0.02
IRX4P78413 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
IRX4P78413 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 AC004899.2-201ENST00000622993 3860 ntBASIC14.92□□□□□ -0.02
IRX4P78413 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
IRX4P78413 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
IRX4P78413 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IRX4P78413 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 CICP16-201ENST00000502609 2813 ntBASIC14.91□□□□□ -0.02
IRX4P78413 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.91□□□□□ -0.02
IRX4P78413 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
IRX4P78413 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.91□□□□□ -0.02
IRX4P78413 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 AC138466.3-201ENST00000619983 221 ntBASIC14.91□□□□□ -0.02
IRX4P78413 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 AC068587.8-201ENST00000641239 219 ntBASIC14.91□□□□□ -0.02
IRX4P78413 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IRX4P78413 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
IRX4P78413 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
IRX4P78413 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.9□□□□□ -0.02
IRX4P78413 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
IRX4P78413 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
IRX4P78413 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IRX4P78413 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.9□□□□□ -0.02
IRX4P78413 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IRX4P78413 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms