Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NR4A1P22736 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.32□□□□□ -0.28
NR4A1P22736 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NR4A1P22736 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.32□□□□□ -0.28
NR4A1P22736 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.32□□□□□ -0.28
NR4A1P22736 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.32□□□□□ -0.28
NR4A1P22736 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
NR4A1P22736 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NR4A1P22736 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NR4A1P22736 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NR4A1P22736 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NR4A1P22736 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 AP001063.1-201ENST00000568332 529 ntBASIC13.31□□□□□ -0.28
NR4A1P22736 AC009486.1-201ENST00000569860 813 ntBASIC13.31□□□□□ -0.28
NR4A1P22736 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.31□□□□□ -0.28
NR4A1P22736 PCDHB17P-202ENST00000623466 3066 ntBASIC13.31□□□□□ -0.28
NR4A1P22736 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.31□□□□□ -0.28
NR4A1P22736 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.31□□□□□ -0.28
NR4A1P22736 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NR4A1P22736 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NR4A1P22736 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NR4A1P22736 ACKR1-201ENST00000368121 1240 ntBASIC13.3□□□□□ -0.28
NR4A1P22736 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NR4A1P22736 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.3□□□□□ -0.28
NR4A1P22736 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.3□□□□□ -0.28
NR4A1P22736 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.3□□□□□ -0.28
NR4A1P22736 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NR4A1P22736 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NR4A1P22736 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.3□□□□□ -0.28
NR4A1P22736 CLUHP6-201ENST00000580789 941 ntBASIC13.3□□□□□ -0.28
NR4A1P22736 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms