Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.71□□□□□ -0.05
CD48P09326 TSPY25P-201ENST00000429463 745 ntBASIC14.71□□□□□ -0.05
CD48P09326 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.71□□□□□ -0.05
CD48P09326 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.71□□□□□ -0.05
CD48P09326 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 AL359881.2-201ENST00000602973 570 ntBASIC14.71□□□□□ -0.05
CD48P09326 AL118558.3-201ENST00000607414 1079 ntBASIC14.71□□□□□ -0.05
CD48P09326 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CD48P09326 AL136295.7-201ENST00000619226 1200 ntBASIC14.71□□□□□ -0.05
CD48P09326 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD48P09326 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CD48P09326 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
CD48P09326 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CD48P09326 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CD48P09326 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.71□□□□□ -0.06
CD48P09326 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.71□□□□□ -0.06
CD48P09326 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD48P09326 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CD48P09326 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 RPS9P1-201ENST00000419943 583 ntBASIC14.7□□□□□ -0.06
CD48P09326 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.7□□□□□ -0.06
CD48P09326 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CD48P09326 AC093752.3-201ENST00000567343 901 ntBASIC14.7□□□□□ -0.06
CD48P09326 MIR497HG-202ENST00000572453 3838 ntBASIC14.7□□□□□ -0.06
CD48P09326 KRT18P8-201ENST00000581937 1246 ntBASIC14.7□□□□□ -0.06
CD48P09326 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.7□□□□□ -0.06
CD48P09326 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD48P09326 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 AL022334.2-201ENST00000610000 484 ntBASIC14.7□□□□□ -0.06
CD48P09326 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD48P09326 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.7□□□□□ -0.06
CD48P09326 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.7□□□□□ -0.06
CD48P09326 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD48P09326 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD48P09326 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 CR383656.2-201ENST00000548656 2254 ntBASIC14.69□□□□□ -0.06
CD48P09326 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.69□□□□□ -0.06
CD48P09326 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.69□□□□□ -0.06
CD48P09326 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD48P09326 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms