Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.13□□□□□ -0.31
THBS1P07996 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 PFN1P12-201ENST00000455938 534 ntBASIC13.13□□□□□ -0.31
THBS1P07996 RPL13AP20-201ENST00000459725 609 ntBASIC13.13□□□□□ -0.31
THBS1P07996 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 GOLGA2P8-201ENST00000505201 779 ntBASIC13.13□□□□□ -0.31
THBS1P07996 FAM86HP-204ENST00000513466 959 ntBASIC13.13□□□□□ -0.31
THBS1P07996 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.13□□□□□ -0.31
THBS1P07996 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.13□□□□□ -0.31
THBS1P07996 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.13□□□□□ -0.31
THBS1P07996 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.13□□□□□ -0.31
THBS1P07996 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
THBS1P07996 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 BNIP3P13-201ENST00000599968 566 ntBASIC13.13□□□□□ -0.31
THBS1P07996 AC244093.1-201ENST00000610837 814 ntBASIC13.13□□□□□ -0.31
THBS1P07996 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.13□□□□□ -0.31
THBS1P07996 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.13□□□□□ -0.31
THBS1P07996 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
THBS1P07996 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
THBS1P07996 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 AL359183.1-201ENST00000623796 2132 ntBASIC13.12□□□□□ -0.31
THBS1P07996 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
THBS1P07996 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 MIR663B-201ENST00000408361 115 ntBASIC13.12□□□□□ -0.31
THBS1P07996 GPAA1P2-201ENST00000417923 928 ntBASIC13.12□□□□□ -0.31
THBS1P07996 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.12□□□□□ -0.31
THBS1P07996 AC005730.2-201ENST00000564549 1184 ntBASIC13.12□□□□□ -0.31
THBS1P07996 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.12□□□□□ -0.31
THBS1P07996 AC092299.1-201ENST00000632679 757 ntBASIC13.12□□□□□ -0.31
THBS1P07996 AL139099.5-201ENST00000635274 300 ntBASIC13.12□□□□□ -0.31
THBS1P07996 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 ABCD1P2-201ENST00000429313 1601 ntBASIC13.12□□□□□ -0.31
THBS1P07996 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
THBS1P07996 AC087386.2-201ENST00000623212 4637 ntBASIC13.12□□□□□ -0.31
THBS1P07996 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
THBS1P07996 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
THBS1P07996 LINC00115-201ENST00000473798 1317 ntBASIC13.12□□□□□ -0.31
THBS1P07996 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms