Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC18.07■□□□□ 0.48
COL5A2P05997 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.07■□□□□ 0.48
COL5A2P05997 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC18.07■□□□□ 0.48
COL5A2P05997 RN7SL162P-201ENST00000579233 292 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC18.07■□□□□ 0.48
COL5A2P05997 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC18.07■□□□□ 0.48
COL5A2P05997 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL5A2P05997 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.06■□□□□ 0.48
COL5A2P05997 SFPQP1-201ENST00000446621 1786 ntBASIC18.06■□□□□ 0.48
COL5A2P05997 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC18.06■□□□□ 0.48
COL5A2P05997 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL5A2P05997 POP5-201ENST00000341039 913 ntTSL 2 BASIC18.06■□□□□ 0.48
COL5A2P05997 OR7E12P-201ENST00000344740 973 ntBASIC18.06■□□□□ 0.48
COL5A2P05997 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.06■□□□□ 0.48
COL5A2P05997 AF186996.6-201ENST00000485294 149 ntBASIC18.06■□□□□ 0.48
COL5A2P05997 AC133555.4-201ENST00000569081 152 ntBASIC18.06■□□□□ 0.48
COL5A2P05997 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.06■□□□□ 0.48
COL5A2P05997 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC18.06■□□□□ 0.48
COL5A2P05997 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COL5A2P05997 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.06■□□□□ 0.48
COL5A2P05997 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL5A2P05997 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COL5A2P05997 AC104640.1-201ENST00000562617 2109 ntBASIC18.05■□□□□ 0.48
COL5A2P05997 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 AC061965.1-201ENST00000560524 1465 ntBASIC18.05■□□□□ 0.48
COL5A2P05997 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.05■□□□□ 0.48
COL5A2P05997 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.05■□□□□ 0.48
COL5A2P05997 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC18.05■□□□□ 0.48
COL5A2P05997 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC18.05■□□□□ 0.48
COL5A2P05997 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL5A2P05997 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL5A2P05997 CICP24-201ENST00000605464 2705 ntBASIC18.05■□□□□ 0.48
COL5A2P05997 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.05■□□□□ 0.48
COL5A2P05997 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL5A2P05997 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.04■□□□□ 0.48
COL5A2P05997 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC18.04■□□□□ 0.48
COL5A2P05997 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.04■□□□□ 0.48
COL5A2P05997 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
COL5A2P05997 OR6D1P-203ENST00000641209 4860 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL5A2P05997 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
COL5A2P05997 SNORD88B-201ENST00000408454 91 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC18.04■□□□□ 0.48
COL5A2P05997 SAP18P2-201ENST00000434334 459 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 RPSAP16-201ENST00000447583 821 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.04■□□□□ 0.48
COL5A2P05997 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC18.04■□□□□ 0.48
COL5A2P05997 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
COL5A2P05997 AL513497.1-201ENST00000624273 2083 ntBASIC18.04■□□□□ 0.48
COL5A2P05997 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL5A2P05997 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.04■□□□□ 0.48
COL5A2P05997 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC18.03■□□□□ 0.48
COL5A2P05997 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL5A2P05997 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms