Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 AP000356.3-201ENST00000382243 753 ntBASIC16.95■□□□□ 0.3
CHGBP05060 MIR33B-201ENST00000385104 96 ntBASIC16.95■□□□□ 0.3
CHGBP05060 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.95■□□□□ 0.3
CHGBP05060 SLC25A15P3-201ENST00000505530 290 ntBASIC16.95■□□□□ 0.3
CHGBP05060 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.95■□□□□ 0.3
CHGBP05060 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.95■□□□□ 0.3
CHGBP05060 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.95■□□□□ 0.3
CHGBP05060 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.95■□□□□ 0.3
CHGBP05060 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.95■□□□□ 0.3
CHGBP05060 AC018635.2-201ENST00000608625 364 ntBASIC16.95■□□□□ 0.3
CHGBP05060 AC025262.2-201ENST00000623975 1056 ntBASIC16.95■□□□□ 0.3
CHGBP05060 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.95■□□□□ 0.3
CHGBP05060 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.95■□□□□ 0.3
CHGBP05060 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.95■□□□□ 0.3
CHGBP05060 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHGBP05060 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHGBP05060 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.94■□□□□ 0.3
CHGBP05060 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 AL627422.1-201ENST00000434104 580 ntBASIC16.94■□□□□ 0.3
CHGBP05060 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.94■□□□□ 0.3
CHGBP05060 ORAOV1P1-201ENST00000503108 395 ntBASIC16.94■□□□□ 0.3
CHGBP05060 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.94■□□□□ 0.3
CHGBP05060 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
CHGBP05060 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 AC005632.3-201ENST00000605544 308 ntBASIC16.94■□□□□ 0.3
CHGBP05060 AC073352.2-201ENST00000609385 439 ntBASIC16.94■□□□□ 0.3
CHGBP05060 AC242376.2-201ENST00000619355 883 ntBASIC16.94■□□□□ 0.3
CHGBP05060 AL805961.1-201ENST00000642026 753 ntBASIC16.94■□□□□ 0.3
CHGBP05060 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 AC067930.6-201ENST00000623257 4947 ntBASIC16.94■□□□□ 0.3
CHGBP05060 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 AC006480.2-201ENST00000609770 1337 ntBASIC16.94■□□□□ 0.3
CHGBP05060 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHGBP05060 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.94■□□□□ 0.3
CHGBP05060 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.94■□□□□ 0.3
CHGBP05060 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.93■□□□□ 0.3
CHGBP05060 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.93■□□□□ 0.3
CHGBP05060 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.93■□□□□ 0.3
CHGBP05060 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.93■□□□□ 0.3
CHGBP05060 TMEM198B-204ENST00000484016 896 ntBASIC16.93■□□□□ 0.3
CHGBP05060 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.93■□□□□ 0.3
CHGBP05060 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.93■□□□□ 0.3
CHGBP05060 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.93■□□□□ 0.3
CHGBP05060 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.93■□□□□ 0.3
CHGBP05060 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms