Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
VTNP04004 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 RPL3P2-204ENST00000413027 1203 ntBASIC15.47■□□□□ 0.07
VTNP04004 OR52M2P-201ENST00000414298 959 ntBASIC15.47■□□□□ 0.07
VTNP04004 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.47■□□□□ 0.07
VTNP04004 AL355334.1-201ENST00000417713 215 ntBASIC15.47■□□□□ 0.07
VTNP04004 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.47■□□□□ 0.07
VTNP04004 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 AC084752.1-201ENST00000509766 622 ntBASIC15.47■□□□□ 0.07
VTNP04004 IGHV1-12-201ENST00000518307 205 ntBASIC15.47■□□□□ 0.07
VTNP04004 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.47■□□□□ 0.07
VTNP04004 SNORD3B-1-201ENST00000577988 758 ntBASIC15.47■□□□□ 0.07
VTNP04004 AL359091.4-201ENST00000610052 409 ntBASIC15.47■□□□□ 0.07
VTNP04004 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.47■□□□□ 0.07
VTNP04004 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 HLA-C-210ENST00000640219 976 ntBASIC15.47■□□□□ 0.07
VTNP04004 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VTNP04004 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VTNP04004 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VTNP04004 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 AC004554.1-201ENST00000422830 1468 ntBASIC15.46■□□□□ 0.07
VTNP04004 AC025183.3-201ENST00000623526 1482 ntBASIC15.46■□□□□ 0.07
VTNP04004 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.46■□□□□ 0.07
VTNP04004 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
VTNP04004 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 AL513477.1-201ENST00000602865 2407 ntBASIC15.46■□□□□ 0.07
VTNP04004 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
VTNP04004 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.46■□□□□ 0.07
VTNP04004 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.46■□□□□ 0.07
VTNP04004 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.46■□□□□ 0.07
VTNP04004 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.46■□□□□ 0.07
VTNP04004 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 BAK1P1-201ENST00000317045 636 ntBASIC15.46■□□□□ 0.07
VTNP04004 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.46■□□□□ 0.07
VTNP04004 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.46■□□□□ 0.07
VTNP04004 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.46■□□□□ 0.07
VTNP04004 STK24P1-201ENST00000455035 1291 ntBASIC15.46■□□□□ 0.07
VTNP04004 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.46■□□□□ 0.07
VTNP04004 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 MIR5196-201ENST00000578146 115 ntBASIC15.46■□□□□ 0.07
VTNP04004 AL031673.1-201ENST00000611460 466 ntBASIC15.46■□□□□ 0.07
VTNP04004 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
VTNP04004 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.46■□□□□ 0.07
VTNP04004 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
VTNP04004 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
VTNP04004 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VTNP04004 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
VTNP04004 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.46■□□□□ 0.06
VTNP04004 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
VTNP04004 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
VTNP04004 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VTNP04004 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
VTNP04004 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VTNP04004 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.46■□□□□ 0.06
VTNP04004 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.46■□□□□ 0.06
VTNP04004 AC097376.2-205ENST00000610159 5334 ntBASIC15.46■□□□□ 0.06
VTNP04004 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.45■□□□□ 0.06
VTNP04004 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms