Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC131212.3-201ENST00000624087 4219 ntBASIC10.99□□□□□ -0.65
TRBV12-3P01733 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ALG1L13P-202ENST00000519320 584 ntBASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 HMGA1P1-201ENST00000415560 1062 ntBASIC10.98□□□□□ -0.65
TRBV12-3P01733 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 PDIA3P2-201ENST00000428073 158 ntBASIC10.98□□□□□ -0.65
TRBV12-3P01733 AC005014.1-201ENST00000432006 2976 ntBASIC10.98□□□□□ -0.65
TRBV12-3P01733 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 IGHJ2P-201ENST00000454480 60 ntBASIC10.98□□□□□ -0.65
TRBV12-3P01733 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRBV12-3P01733 NUP210P1-202ENST00000504322 710 ntBASIC10.98□□□□□ -0.65
TRBV12-3P01733 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.98□□□□□ -0.65
TRBV12-3P01733 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms