Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 FMO6P-201ENST00000236166 1620 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 ABCD1P2-201ENST00000429313 1601 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 KRT17P5-201ENST00000332088 839 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ISCA2P1-201ENST00000425548 448 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-2O95096 FNTAP2-201ENST00000430308 634 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-2O95096 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
NKX2-2O95096 AC007274.1-201ENST00000439805 662 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 NDUFV2P1-201ENST00000596415 907 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.07□□□□□ -0.32
NKX2-2O95096 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 AC091544.8-201ENST00000619490 361 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 AC079336.7-201ENST00000623428 1078 ntBASIC13.07□□□□□ -0.32
NKX2-2O95096 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NKX2-2O95096 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-2O95096 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-2O95096 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC105206.1-202ENST00000314927 2368 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-2O95096 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 SNORA50C-201ENST00000408535 133 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC244107.1-201ENST00000442033 332 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.06□□□□□ -0.32
NKX2-2O95096 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 ALG1L13P-202ENST00000519320 584 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 POU5F1P2-201ENST00000521750 823 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.06□□□□□ -0.32
NKX2-2O95096 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.06□□□□□ -0.32
NKX2-2O95096 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 SNORA50.1-201ENST00000628590 135 ntBASIC13.06□□□□□ -0.32
NKX2-2O95096 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.06□□□□□ -0.32
NKX2-2O95096 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NKX2-2O95096 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
NKX2-2O95096 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms