Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC6.09□□□□□ -1.43
USH2AO75445 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 KRT18P8-201ENST00000581937 1246 ntBASIC6.09□□□□□ -1.43
USH2AO75445 SARS2-211ENST00000598831 665 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
USH2AO75445 FKBP4P7-201ENST00000433874 1363 ntBASIC6.09□□□□□ -1.44
USH2AO75445 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
USH2AO75445 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC6.09□□□□□ -1.44
USH2AO75445 EEF1GP3-201ENST00000421044 1288 ntBASIC6.09□□□□□ -1.44
USH2AO75445 TRBV22-1-201ENST00000424543 337 ntBASIC6.09□□□□□ -1.44
USH2AO75445 HLA-W-207ENST00000439514 771 ntBASIC6.09□□□□□ -1.44
USH2AO75445 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC6.09□□□□□ -1.44
USH2AO75445 AC011773.4-202ENST00000566000 1264 ntBASIC6.09□□□□□ -1.44
USH2AO75445 AC133555.4-201ENST00000569081 152 ntBASIC6.09□□□□□ -1.44
USH2AO75445 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC6.09□□□□□ -1.44
USH2AO75445 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC6.09□□□□□ -1.44
USH2AO75445 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
USH2AO75445 AC080038.2-201ENST00000617734 423 ntBASIC6.09□□□□□ -1.44
USH2AO75445 AC020763.2-201ENST00000623155 1255 ntBASIC6.09□□□□□ -1.44
USH2AO75445 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC6.09□□□□□ -1.44
USH2AO75445 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USH2AO75445 TBC1D3P1-201ENST00000590047 1693 ntBASIC6.09□□□□□ -1.44
USH2AO75445 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC6.08□□□□□ -1.44
USH2AO75445 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC6.08□□□□□ -1.44
USH2AO75445 AC233724.7-201ENST00000511476 253 ntBASIC6.08□□□□□ -1.44
USH2AO75445 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC6.08□□□□□ -1.44
USH2AO75445 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC6.08□□□□□ -1.44
USH2AO75445 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC6.08□□□□□ -1.44
USH2AO75445 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 AL606760.3-201ENST00000569869 3591 ntBASIC6.08□□□□□ -1.44
USH2AO75445 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC6.08□□□□□ -1.44
USH2AO75445 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USH2AO75445 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 HNRNPA1P30-202ENST00000440699 997 ntBASIC6.08□□□□□ -1.44
USH2AO75445 AC007992.1-201ENST00000513953 953 ntBASIC6.08□□□□□ -1.44
USH2AO75445 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC6.08□□□□□ -1.44
USH2AO75445 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC6.08□□□□□ -1.44
USH2AO75445 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 AL109983.1-201ENST00000603234 646 ntBASIC6.08□□□□□ -1.44
USH2AO75445 AC244097.1-201ENST00000621631 1216 ntBASIC6.08□□□□□ -1.44
USH2AO75445 NME1-209ENST00000511355 1645 ntTSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC6.08□□□□□ -1.44
USH2AO75445 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
USH2AO75445 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 807.5 ms