Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 RNA5SP359-201ENST00000364838 113 ntBASIC15.17■□□□□ 0.02
O00370 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.17■□□□□ 0.02
O00370 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 AL008707.1-201ENST00000422498 534 ntBASIC15.17■□□□□ 0.02
O00370 SPTLC1P5-201ENST00000450718 252 ntBASIC15.17■□□□□ 0.02
O00370 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.17■□□□□ 0.02
O00370 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.17■□□□□ 0.02
O00370 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.17■□□□□ 0.02
O00370 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 RN7SL774P-201ENST00000577467 290 ntBASIC15.17■□□□□ 0.02
O00370 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.17■□□□□ 0.02
O00370 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.17■□□□□ 0.02
O00370 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.17■□□□□ 0.02
O00370 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.17■□□□□ 0.02
O00370 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 AC007326.2-201ENST00000624224 7579 ntBASIC15.17■□□□□ 0.02
O00370 AC072061.1-201ENST00000569710 2234 ntBASIC15.17■□□□□ 0.02
O00370 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
O00370 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
O00370 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
O00370 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
O00370 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
O00370 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
O00370 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 AC239868.1-201ENST00000369385 493 ntBASIC15.16■□□□□ 0.02
O00370 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 AC103592.1-201ENST00000394513 664 ntBASIC15.16■□□□□ 0.02
O00370 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.16■□□□□ 0.02
O00370 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.16■□□□□ 0.02
O00370 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.16■□□□□ 0.02
O00370 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.16■□□□□ 0.02
O00370 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.16■□□□□ 0.02
O00370 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 MEG3_2.1-201ENST00000611456 105 ntBASIC15.16■□□□□ 0.02
O00370 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
O00370 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
O00370 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
O00370 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms