Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AC244394.1-201ENST00000435000 1665 ntBASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AL645933.1-201ENST00000440087 609 ntBASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ACR-203ENST00000529621 708 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AC104506.1-201ENST00000609247 429 ntBASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
HLA-DRB4X5D2U9 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC10.79□□□□□ -0.68
HLA-DRB4X5D2U9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms