Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAI2Q9Y5P3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AC011474.4-201ENST00000623523 2076 ntBASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AL161670.2-201ENST00000557650 1227 ntBASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 AL590824.1-201ENST00000403828 1349 ntBASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 SHMT1P1-201ENST00000419974 1312 ntBASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAI2Q9Y5P3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MIR1227-201ENST00000408484 88 ntBASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 AC006335.1-201ENST00000445200 547 ntBASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 AC073150.1-201ENST00000450406 1084 ntBASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 AC135983.4-201ENST00000564116 1262 ntBASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MIR6769A-201ENST00000617340 73 ntBASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.38□□□□□ -0.11
RAI2Q9Y5P3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms