Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 EEF1DP5-201ENST00000431410 772 ntBASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AC027612.2-202ENST00000445955 1199 ntBASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AP000553.2-201ENST00000609038 441 ntBASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 SDCBP2P1-201ENST00000416115 614 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 KRT8P30-201ENST00000432100 650 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 CCND3P1-201ENST00000438347 580 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 RNU1-80P-201ENST00000459500 161 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 RN7SL684P-201ENST00000465665 294 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 AC005089.1-201ENST00000619486 2241 ntBASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK2Q9UPX8 AL157823.1-201ENST00000403727 628 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC053503.3-201ENST00000448375 114 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC004801.1-201ENST00000549557 360 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AC020763.3-201ENST00000625095 2904 ntBASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SHANK2Q9UPX8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 AC007191.1-201ENST00000623179 2995 ntBASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK2Q9UPX8 RHOQP2-201ENST00000449922 579 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms