Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SALL4P6-201ENST00000429385 1691 ntBASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.96■□□□□ 0.3
ZC3H4Q9UPT8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AC091951.1-201ENST00000512854 2465 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 LINC00552-201ENST00000625151 2579 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AC023024.2-201ENST00000623561 1993 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 TPT1P9-201ENST00000413759 514 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 BX088651.3-201ENST00000418155 352 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AC092810.2-201ENST00000431570 362 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 RN7SL838P-201ENST00000481676 295 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 MIR4640-201ENST00000581824 90 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 AC104506.1-201ENST00000609247 429 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 MEP1AP1-201ENST00000636082 1097 ntBASIC16.95■□□□□ 0.3
ZC3H4Q9UPT8 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms