Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CD248Q9HCU0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD248Q9HCU0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CD248Q9HCU0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.08■□□□□ 0.01
CD248Q9HCU0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD248Q9HCU0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CD248Q9HCU0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.08■□□□□ 0
CD248Q9HCU0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.08■□□□□ 0
CD248Q9HCU0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.08■□□□□ 0
CD248Q9HCU0 AC245884.6-201ENST00000515672 1067 ntBASIC15.08■□□□□ 0
CD248Q9HCU0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.08■□□□□ 0
CD248Q9HCU0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.08■□□□□ 0
CD248Q9HCU0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CD248Q9HCU0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.08■□□□□ 0
CD248Q9HCU0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CD248Q9HCU0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD248Q9HCU0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.07■□□□□ 0
CD248Q9HCU0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.07■□□□□ 0
CD248Q9HCU0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.07■□□□□ 0
CD248Q9HCU0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.07■□□□□ 0
CD248Q9HCU0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 VDAC1P1-201ENST00000439229 848 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.07■□□□□ 0
CD248Q9HCU0 PUDPP3-201ENST00000445368 636 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 RN7SL11P-201ENST00000471305 293 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.07■□□□□ 0
CD248Q9HCU0 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.07■□□□□ 0
CD248Q9HCU0 AL160314.3-201ENST00000556041 767 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.07■□□□□ 0
CD248Q9HCU0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.07■□□□□ 0
CD248Q9HCU0 SNORD3B-2-202ENST00000571722 791 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.07■□□□□ 0
CD248Q9HCU0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.07■□□□□ 0
CD248Q9HCU0 AC079336.7-201ENST00000623428 1078 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.07■□□□□ 0
CD248Q9HCU0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 FAM90A12P-201ENST00000519497 2375 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 FAM90A24P-201ENST00000520792 2369 ntBASIC15.07■□□□□ 0
CD248Q9HCU0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.07■□□□□ 0
CD248Q9HCU0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CD248Q9HCU0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD248Q9HCU0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CD248Q9HCU0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD248Q9HCU0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms