Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VRK1Q99986 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.7□□□□□ -0.38
VRK1Q99986 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.7□□□□□ -0.38
VRK1Q99986 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 RN7SKP175-201ENST00000408472 289 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.7□□□□□ -0.38
VRK1Q99986 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 AC091804.1-201ENST00000486888 567 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AC005740.2-201ENST00000511085 419 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.7□□□□□ -0.38
VRK1Q99986 AC100827.2-201ENST00000563214 1194 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AC005730.2-201ENST00000564549 1184 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.7□□□□□ -0.38
VRK1Q99986 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 AL451050.2-201ENST00000606967 682 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AL139099.5-201ENST00000635274 300 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 AC018735.1-201ENST00000437208 1502 ntBASIC12.7□□□□□ -0.38
VRK1Q99986 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VRK1Q99986 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
VRK1Q99986 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VRK1Q99986 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VRK1Q99986 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 SALL4P5-201ENST00000419001 1760 ntBASIC12.69□□□□□ -0.38
VRK1Q99986 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VRK1Q99986 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 AL354877.1-201ENST00000424412 413 ntBASIC12.69□□□□□ -0.38
VRK1Q99986 CALR4P-201ENST00000431943 946 ntBASIC12.69□□□□□ -0.38
VRK1Q99986 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.69□□□□□ -0.38
VRK1Q99986 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.69□□□□□ -0.38
VRK1Q99986 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.69□□□□□ -0.38
VRK1Q99986 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.69□□□□□ -0.38
VRK1Q99986 AC138028.6-201ENST00000616106 1482 ntBASIC12.69□□□□□ -0.38
VRK1Q99986 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.69□□□□□ -0.38
VRK1Q99986 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VRK1Q99986 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms