Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 USP17L6P-201ENST00000382470 1197 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ERCC4Q92889 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC4Q92889 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 CNN2P8-201ENST00000421872 913 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 AC016694.1-201ENST00000434179 700 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.2■□□□□ 0.18
ERCC4Q92889 TTTY23B-201ENST00000442790 549 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 CHMP1AP1-201ENST00000445563 662 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 AC007551.1-201ENST00000457394 519 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC4Q92889 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ERCC4Q92889 AP005018.1-201ENST00000525475 301 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.2■□□□□ 0.18
ERCC4Q92889 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 PPY2P-201ENST00000582808 702 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC4Q92889 AC105233.6-201ENST00000642093 218 ntBASIC16.2■□□□□ 0.18
ERCC4Q92889 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC4Q92889 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ERCC4Q92889 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC4Q92889 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ERCC4Q92889 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC4Q92889 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 AL008718.2-201ENST00000609206 1313 ntBASIC16.19■□□□□ 0.18
ERCC4Q92889 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC4Q92889 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 RN7SL692P-201ENST00000464677 288 ntBASIC16.19■□□□□ 0.18
ERCC4Q92889 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC4Q92889 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ERCC4Q92889 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ERCC4Q92889 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC4Q92889 MIR4783-201ENST00000580343 82 ntBASIC16.19■□□□□ 0.18
ERCC4Q92889 BTNL10-201ENST00000595971 695 ntBASIC16.19■□□□□ 0.18
ERCC4Q92889 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 SHC1P1-201ENST00000425230 1745 ntBASIC16.19■□□□□ 0.18
ERCC4Q92889 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC4Q92889 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC4Q92889 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC4Q92889 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ERCC4Q92889 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ERCC4Q92889 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC4Q92889 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC4Q92889 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
ERCC4Q92889 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC4Q92889 AC098614.1-201ENST00000368528 745 ntBASIC16.18■□□□□ 0.18
ERCC4Q92889 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms