Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AL161932.2-201ENST00000435436 679 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC116345.2-201ENST00000512837 523 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC134698.3-201ENST00000523880 214 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC105129.2-201ENST00000559536 390 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AL353726.2-201ENST00000623259 884 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 AL109837.1-201ENST00000603272 613 ntBASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 AC090386.2-201ENST00000623010 1039 ntBASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TBC1D3J-201ENST00000620719 1426 ntBASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRIM48Q8IWZ4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM48Q8IWZ4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms