Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 AC022080.1-201ENST00000366255 781 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 AC017007.3-201ENST00000479865 435 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 RN7SL147P-201ENST00000487345 298 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 EIF5AP2-201ENST00000585668 1047 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 AC018695.6-201ENST00000614011 534 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 AC092115.1-201ENST00000566277 1402 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 AC015802.1-201ENST00000588104 1449 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 RPL3P5-201ENST00000441645 1232 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 KNOP1P1-201ENST00000542108 989 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 AC005274.1-201ENST00000623460 802 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 AP001267.2-201ENST00000532619 2086 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 AC144831.1-201ENST00000573312 2656 ntBASIC15.03■□□□□ -0
NPAS4Q8IUM7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPAS4Q8IUM7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPAS4Q8IUM7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.02■□□□□ -0
NPAS4Q8IUM7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPAS4Q8IUM7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms