Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ACTG1P2-201ENST00000415776 1125 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 ACTG1P11-201ENST00000425411 1125 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AL133466.1-201ENST00000447582 150 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AL353637.1-201ENST00000451571 732 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AC017007.3-201ENST00000479865 435 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 POU5F1P2-201ENST00000521750 823 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 CU633904.3-201ENST00000624042 1029 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AC090643.2-201ENST00000623442 2029 ntBASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TTC39BQ5VTQ0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 IGHJ2P-201ENST00000454480 60 ntBASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 AC091812.3-201ENST00000621362 345 ntBASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 AC145098.2-201ENST00000623593 3026 ntBASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 FRMPD2B-201ENST00000431305 1347 ntBASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TCAF1P1-201ENST00000414990 2232 ntBASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TTC39BQ5VTQ0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TTC39BQ5VTQ0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms