Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 AC134915.1-201ENST00000426461 574 ntBASIC11.39□□□□□ -0.59
FAM78BQ5VT40 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 AC093004.1-201ENST00000508850 424 ntBASIC11.39□□□□□ -0.59
FAM78BQ5VT40 AC104596.2-201ENST00000512793 793 ntBASIC11.39□□□□□ -0.59
FAM78BQ5VT40 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 AC135782.3-201ENST00000562782 2105 ntBASIC11.39□□□□□ -0.59
FAM78BQ5VT40 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
FAM78BQ5VT40 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 C1QBPP1-201ENST00000400117 770 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 UGT1A2P-201ENST00000454886 866 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 FO681548.1-201ENST00000455617 1132 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 AC055876.2-201ENST00000531834 546 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 RRP7BP-205ENST00000566851 833 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 AC120045.2-201ENST00000567334 178 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms