Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13□□□□□ -0.33
RBM48Q5RL73 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 AC020910.5-201ENST00000623668 1865 ntBASIC13□□□□□ -0.33
RBM48Q5RL73 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13□□□□□ -0.33
RBM48Q5RL73 AC114501.2-201ENST00000439631 535 ntBASIC13□□□□□ -0.33
RBM48Q5RL73 GNAQP1-201ENST00000444815 1067 ntBASIC13□□□□□ -0.33
RBM48Q5RL73 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13□□□□□ -0.33
RBM48Q5RL73 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 YBX1P5-201ENST00000509441 847 ntBASIC13□□□□□ -0.33
RBM48Q5RL73 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13□□□□□ -0.33
RBM48Q5RL73 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13□□□□□ -0.33
RBM48Q5RL73 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13□□□□□ -0.33
RBM48Q5RL73 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13□□□□□ -0.33
RBM48Q5RL73 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13□□□□□ -0.33
RBM48Q5RL73 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RBM48Q5RL73 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC13□□□□□ -0.33
RBM48Q5RL73 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC011481.3-201ENST00000623895 5594 ntBASIC12.99□□□□□ -0.33
RBM48Q5RL73 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 REXO1L1P-201ENST00000379010 6598 ntBASIC12.99□□□□□ -0.33
RBM48Q5RL73 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AP001582.1-201ENST00000525856 295 ntBASIC12.99□□□□□ -0.33
RBM48Q5RL73 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.99□□□□□ -0.33
RBM48Q5RL73 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RBM48Q5RL73 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms