Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 AC067750.1-201ENST00000608826 6545 ntBASIC15.15■□□□□ 0.02
CDH8P55286 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDH8P55286 AC104581.4-201ENST00000623126 3052 ntBASIC15.15■□□□□ 0.02
CDH8P55286 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 AL591122.2-201ENST00000624125 1853 ntBASIC15.14■□□□□ 0.01
CDH8P55286 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDH8P55286 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH8P55286 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 RN7SL769P-201ENST00000469386 295 ntBASIC15.14■□□□□ 0.01
CDH8P55286 CHCHD2P2-201ENST00000503744 321 ntBASIC15.14■□□□□ 0.01
CDH8P55286 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH8P55286 RN7SL455P-201ENST00000580629 282 ntBASIC15.14■□□□□ 0.01
CDH8P55286 SIGLEC18P-201ENST00000602271 909 ntBASIC15.14■□□□□ 0.01
CDH8P55286 AC006453.1-201ENST00000636037 1257 ntBASIC15.14■□□□□ 0.01
CDH8P55286 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH8P55286 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH8P55286 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH8P55286 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH8P55286 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH8P55286 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH8P55286 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 MIR557-201ENST00000385239 98 ntBASIC15.13■□□□□ 0.01
CDH8P55286 MIR645-201ENST00000385283 94 ntBASIC15.13■□□□□ 0.01
CDH8P55286 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH8P55286 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 AC006987.1-201ENST00000413610 527 ntBASIC15.13■□□□□ 0.01
CDH8P55286 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH8P55286 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH8P55286 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 DUTP3-201ENST00000450025 415 ntBASIC15.13■□□□□ 0.01
CDH8P55286 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 AP000358.1-201ENST00000456260 156 ntBASIC15.13■□□□□ 0.01
CDH8P55286 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH8P55286 GOLGA2P8-201ENST00000505201 779 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms