Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 AC009145.4-201ENST00000625119 1294 ntBASIC13.83□□□□□ -0.2
PDX1P52945 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 MIR193BHG-211ENST00000641433 5365 ntBASIC13.83□□□□□ -0.2
PDX1P52945 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PDX1P52945 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDX1P52945 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 HLA-DMA-203ENST00000395305 777 ntBASIC13.82□□□□□ -0.2
PDX1P52945 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 AL512306.1-201ENST00000432698 848 ntBASIC13.82□□□□□ -0.2
PDX1P52945 AL354861.1-201ENST00000445213 355 ntBASIC13.82□□□□□ -0.2
PDX1P52945 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.82□□□□□ -0.2
PDX1P52945 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.82□□□□□ -0.2
PDX1P52945 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.82□□□□□ -0.2
PDX1P52945 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.82□□□□□ -0.2
PDX1P52945 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PDX1P52945 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.82□□□□□ -0.2
PDX1P52945 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
PDX1P52945 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PDX1P52945 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
PDX1P52945 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.82□□□□□ -0.2
PDX1P52945 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDX1P52945 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 AC152010.1-201ENST00000415779 2006 ntBASIC13.81□□□□□ -0.2
PDX1P52945 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PDX1P52945 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 AL357563.1-201ENST00000404728 395 ntBASIC13.81□□□□□ -0.2
PDX1P52945 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.81□□□□□ -0.2
PDX1P52945 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PDX1P52945 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms