Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MTHFRP42898 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.84□□□□□ -0.03
MTHFRP42898 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MTHFRP42898 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
MTHFRP42898 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
MTHFRP42898 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.84□□□□□ -0.03
MTHFRP42898 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 BPIFB5P-201ENST00000457066 1099 ntBASIC14.84□□□□□ -0.03
MTHFRP42898 AC006529.1-201ENST00000459978 637 ntBASIC14.84□□□□□ -0.03
MTHFRP42898 RN7SL788P-201ENST00000460504 316 ntBASIC14.84□□□□□ -0.03
MTHFRP42898 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.84□□□□□ -0.03
MTHFRP42898 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.84□□□□□ -0.03
MTHFRP42898 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.84□□□□□ -0.03
MTHFRP42898 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.84□□□□□ -0.03
MTHFRP42898 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.84□□□□□ -0.03
MTHFRP42898 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MTHFRP42898 ACE3P-201ENST00000423435 1973 ntBASIC14.84□□□□□ -0.03
MTHFRP42898 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.83□□□□□ -0.03
MTHFRP42898 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
MTHFRP42898 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.83□□□□□ -0.03
MTHFRP42898 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
MTHFRP42898 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.83□□□□□ -0.03
MTHFRP42898 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
MTHFRP42898 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.03
MTHFRP42898 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
MTHFRP42898 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MTHFRP42898 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
MTHFRP42898 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MTHFRP42898 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
MTHFRP42898 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
MTHFRP42898 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.83□□□□□ -0.04
MTHFRP42898 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 OR7E115P-201ENST00000382617 1024 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.83□□□□□ -0.04
MTHFRP42898 ACTBP7-201ENST00000418351 1124 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.83□□□□□ -0.04
MTHFRP42898 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.83□□□□□ -0.04
MTHFRP42898 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.83□□□□□ -0.04
MTHFRP42898 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.83□□□□□ -0.04
MTHFRP42898 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.83□□□□□ -0.04
MTHFRP42898 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 ABHD17AP9-201ENST00000561925 548 ntBASIC14.83□□□□□ -0.04
MTHFRP42898 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.83□□□□□ -0.04
MTHFRP42898 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
MTHFRP42898 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
MTHFRP42898 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms