Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 URB1-AS1-201ENST00000534991 831 ntBASIC17.29■□□□□ 0.36
PDE6BP35913 AC079414.2-201ENST00000567157 1104 ntBASIC17.29■□□□□ 0.36
PDE6BP35913 MIR4746-201ENST00000579802 71 ntBASIC17.29■□□□□ 0.36
PDE6BP35913 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.29■□□□□ 0.36
PDE6BP35913 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.29■□□□□ 0.36
PDE6BP35913 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 AC013268.4-201ENST00000637413 2228 ntBASIC17.29■□□□□ 0.36
PDE6BP35913 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDE6BP35913 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDE6BP35913 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6BP35913 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 SNORA57-201ENST00000383870 149 ntBASIC17.28■□□□□ 0.36
PDE6BP35913 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDE6BP35913 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC17.28■□□□□ 0.36
PDE6BP35913 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.28■□□□□ 0.36
PDE6BP35913 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.28■□□□□ 0.36
PDE6BP35913 AC048382.6-201ENST00000621980 1223 ntBASIC17.28■□□□□ 0.36
PDE6BP35913 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.28■□□□□ 0.36
PDE6BP35913 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 AL022313.4-201ENST00000562756 2046 ntBASIC17.28■□□□□ 0.36
PDE6BP35913 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PDE6BP35913 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.28■□□□□ 0.36
PDE6BP35913 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDE6BP35913 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDE6BP35913 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 PES1P2-201ENST00000449745 1735 ntBASIC17.27■□□□□ 0.36
PDE6BP35913 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDE6BP35913 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PDE6BP35913 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.27■□□□□ 0.36
PDE6BP35913 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PDE6BP35913 HLA-DMA-202ENST00000395303 1007 ntBASIC17.27■□□□□ 0.36
PDE6BP35913 AC092810.2-201ENST00000431570 362 ntBASIC17.27■□□□□ 0.36
PDE6BP35913 AC133141.1-201ENST00000443015 339 ntBASIC17.27■□□□□ 0.36
PDE6BP35913 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.27■□□□□ 0.36
PDE6BP35913 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.27■□□□□ 0.36
PDE6BP35913 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 AC006116.2-201ENST00000589958 988 ntBASIC17.27■□□□□ 0.36
PDE6BP35913 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.27■□□□□ 0.36
PDE6BP35913 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDE6BP35913 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDE6BP35913 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDE6BP35913 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.27■□□□□ 0.35
PDE6BP35913 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PDE6BP35913 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PDE6BP35913 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDE6BP35913 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6BP35913 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PDE6BP35913 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.26■□□□□ 0.35
PDE6BP35913 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6BP35913 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
PDE6BP35913 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms